Bioinformatics Software Tools | For genomic data management and interpretation

Comprehensive bioinformatics software tools

Next-generation sequencers generate massive amounts of data. When you have the right bioinformatics tools, you can aggregate this data, interpret it, and socialize the information quickly.

The Illumina software suite offers data solutions that support genomics research and clinical research from setup to analysis. We embrace changing technology and defy the barriers that challenge innovation.

Setting up your infrastructure

Automate your lab.

Adopt lab automation to improve efficiency.

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Get connected.

Data sharing allows you to publish and collaborate with speed.

Do I build or buy?

See what a LIMS can do for you.

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Pipeline setup & management

Bioinformatics infrastructure and pipeline considerations

Access resources and solutions to help simplify your informatics infrastructure and data analysis pipeline setup.

Explore infrastructure & pipeline setup

Laboratory information management systems (LIMS)

Automate workflows, integrate instruments, and manage samples with ease.

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Sequence file formats

Find options for every kind of data analysis imagineable.

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All pipeline setup & sample management

Multiomics data solutions

Illumina Connected Multiomics is a fully integrated multiomic and multimodal analysis software from Illumina. Researchers can explore multiomic data, reveal deeper biological insights, and accelerate discoveries. With this comprehensive cloud-based platform, biologists can generate powerful statistics and interactive visualizations—no bioinformatics background required.

Learn more about Illumina Connected Multiomics

Sequencing data analysis

Our sequencers come equipped with primary data analysis tools built in. For secondary analysis, our bioinformatics tools align and assemble DNA and RNA fragments to fully sequence a sample so that genetic variants can be determined quickly and effectively. For tertiary analysis, our data interpretation tools empower researchers to turn sequencing data into biological insights.

Learn more about NGS data analysis

Biological interpretation

Bioinformatics software and biological data mining drive insights into fundamental biological processes and the causes of genetic disease. Use our tools to interpret biological variants, understand population data, and employ focused sequencing applications for drug discovery, cancer research, single-cell analysis, and more.

Learn more about biological data interpretation

Illumina software portfolio

Our software ecosystem provides solutions that span across workflows. From specific applications to secondary and tertiary analysis, our seamless software portfolio enables you to hit development milestones faster.

See all Illumina software

Popular bioinformatics tools

Illumina Connected Multiomics

A cloud-based multiomic analysis and interpretation software that enables sample-to-insight workflows with visualizations, scalability, and secure data management.

DRAGEN secondary analysis

Illumina DRAGEN (Dynamic Read Analysis for GENomics) secondary analysis provides accurate, ultra-rapid secondary genomic analysis of sequencing data.

BaseSpace Sequence Hub

Data management and simplified bioinformatics for labs getting started and for rapidly scaling next-generation sequencing operations.

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