Once the domain of bioinformatics experts, RNA sequencing (RNA-Seq) data analysis is now more accessible than ever. Illumina offers push-button RNA-Seq software tools packaged in intuitive user interfaces designed for biologists.
These user-friendly tools support a broad range of next-generation sequencing (NGS) studies, from gene expression analysis to total RNA expression profiling and more.
RNA-Seq data can be instantly and securely transferred, stored, and analyzed in BaseSpace Sequence Hub, the Illumina genomics cloud computing platform. In addition, the Illumina DRAGEN Bio-IT Platform provides accurate, ultra-rapid secondary analysis of RNA-Seq and other NGS data, in BaseSpace Sequence Hub or on-premise. Our BaseSpace RNA-Seq Apps are:
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Based on frequently cited RNA-Seq analysis pipelines, these apps support a broad range of transcriptome data analysis needs. Featured data analysis apps for common RNA-Seq methods are shown in the table below.
Illumina is making it simpler for researchers to detect and identify SARS-CoV-2 and contribute their findings to the community with an integrated software toolkit, free of charge.Learn More
Walk through a typical BaseSpace Sequence Hub RNA sequencing data analysis workflow. Learn how to analyze your results, and view examples of the easily interpretable tables and graphs that the software generates.Read Technical Note
After data analysis, results can be transferred easily to BaseSpace Correlation Engine for functional annotation, to understand the biological effects of gene expression changes. BaseSpace Correlation Engine contains data sets from thousands of public studies that inform biological interpretation. Connect differential gene expression data from RNA-Seq experiments with disease associations, or visualize correlated genes and microRNA targets.Explore BaseSpace Correlation Engine